Regenerative Strategies for Orchard Disease and Pest Control Part Two: Implementing a Systemic Approach

By: Chuck Schembre

Historically, we have been greatly miseducated about plant nutrition by universities and fertilize sales companies. When it comes to understanding how and why balanced plant nutrition leads to optimizing disease and pest resistance, we can give big thanks to experts such as John Kempf and Dr. Kristine Jones, just to name a few. 

We may have always intuitively understood that a healthy, nutrient-dense plant has more immune support — but how do you get there? As I mentioned before, soil biology plays a critical role in the transport and availability of micronutrients. Micronutrients play a crucial role in enhancing plant immunity and protecting against diseases. They are often the missing link in plant nutrition and are not well understood in most fertility programs. 

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Good plant diversity and duff around a tree. Chuck Schembre photo.

Optimizing Plant Nutrition and Systemic Acquired Resistance

If the soil biology is poor, then most micronutrients are low in the plant. Micronutrients such as iron, zinc, manganese, copper, molybdenum and boron are involved in many plant functions. As an example, many are involved in activating enzymes that drive the formation of secondary metabolites. Secondary metabolites include compounds such as phenols and terpenoids, critical metabolites with plant-defense mechanisms and antioxidant properties that support plant immunity. 

Many of these micros also serve in key functions such strengthening the leaf cell wall, making it harder for pathogen hyphae to penetrate and invade the plant. In addition, micronutrients are critical for production and storage of carbohydrates to the plant organs — a mandatory mechanism for plant survival, longevity and consistent fruit set.

When plant secondary metabolites are being produced, then the plant can develop what is called Systemic Acquired Resistance. This means that when a plant is attacked by a pathogen or insect pest, the plant sends out signals and develops an immune response to protect itself. A healthy, nutritionally balanced plant, grown in healthy soil with proper nutrition — and lots of it from the biology — can better defend itself. And guess what? Perennial crops are really good at defending themselves — after all, many species have figured out how to outlive humans!

Another nutritional discussion worthy of mentioning is preventing excessive nutrient loading in the soil and plant. This can create antagonistic responses that weaken plant immunity. As an example, it is well understood that high nitrates in plant tissue results in the plant being much more susceptible to leaf-feeding insects and pathogen colonization. Leaf-piercing insects can digest amino acids but cannot digest leaves high in proteins. High rates of synthetic nitrogen lead to reduced protein synthesis in the plant, which opens the doors for more insect and disease pressure. 

Sap analysis is an important tool for measuring nutrients to manage for plant nutritional balance. Addressing key micronutrients and making sure nitrates are not high in the plant is a good start for beginning to enhance disease suppression and wean off the harsh pesticides. However, I strongly suggest not to get too obsessed with the numbers on a sap spreadsheet. Use them as a general guide. If you don’t optimize soil health practices first, then you will chase your tail on sap testing.

The Role of Bioinoculants and Biostimulants

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The microbial community on the tree’s leaves and branches is important for growers to be aware of and nurture.

Biostimulants provide a food source for microbes. Most also help chelate nutrients and help the plant utilize them more efficiently. It is standard in my work to always fertilizer with a biostimulant. This allows me to greatly reduce the quantity and rate of the product being used — and to get better results. Products like kelp and yucca extract also enhance plant immune response and reduce plant stress. Using these sorts of products can get us another step closer in reducing the detrimental disturbances of hard pesticide chemistries.

The most available biostimulants include fish and soy hydrolosates, humic acid, fulvic acid, kelp and seaweed, molasses, and yucca extract. A little goes a long way, and a combination can provide exceptional synergies, both as soil applied and foliar applications. A combination of biostimulants can serve as a means of mimicking root exudates or other humic substances in the soil. 

Bioinoculants in combination with biostimulants can be very powerful. I am mainly talking about those made on the farm, such compost teas and extracts that are brewed with biostimulants. You can also brew with a low dose of the nutrients your trees need. I call this bionutrient brewing — it creates a solution that is rich in organisms, carbon and nutrients. Be sure to make compost teas and extracts from high-quality compost, such as that from a Johnson-Su bioreactor, or allow the compost to cure for a while to build a good fungal component.

Biopesticides

Do biopesticides work? “I hear they don’t work.” “They are so expensive.” “If I’m going to spray, I want to know it works.” I have this conversation all the time. 

The short answer is that biopesticides are extremely effective — when applied at the right time, when they are well understood, and when the farm has some decent soil health and ecosystem function. There are some products that are actually more effective than their conventional counterpart. But many biopesticides have mixed or even poor results when applied to a highly conventional farm.  When combined with proper soil health management and farm ecosystem function, and when addressing balanced plant nutrition, biopesticides are a strong tool. But they are not a product-for-product replacement strategy. 

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A well-aggregated orchard soil. Chuck Schembre photo.

Some biopesticides even enhance Systemic Acquired Resistance. There many effective bacillus products on the market now to control fungal pathogens such as apple scab, alternaria and mildews. Trichoderma products are effective at reducing root rot pathogens such as phytophthora, pythium, and rhizoctonia. There are many plant-extract-based insecticides, such as neem oils, pyrethrin, thyme, cinnamon and spinosad. 

Some of these products are very expensive, though. In order to get the most out of any product, you have to become a master at scouting and understanding the lifecycle of the species you are managing. Do not think for a moment that if you spend the money to spray, things will be fine. Precise timing is critical. 

The Flaws and Fallacies of Orchard Sanitation

Sanitation practices — the act or blowing, sweeping, shredding, or tilling-in fallen leaves, sometimes including applying nitrogen in order to reduce pathogenic inoculum — is a major expense in many orcharding systems. Yet I believe these practices often actually increase disease. I almost always recommend eliminating sanitation practices with my clients.

Back to the phyllosphere for a moment. The decomposition of leaves begins before the leaves fall and hit the ground. A healthy tree is loaded with decomposing organisms in the canopy. They play a role in leaf color change. When there is an abundance of fungi and bacteria thriving in the canopy, the decomposition process is enhanced. Of course, standard fungicide programs eliminate this. 

Leaf mulch is critical for tree health. This is a tree’s natural cycle to replenish nutrition and feed the soil around the trunk. Decomposing leaf mulch enhances beneficial saprophytic fungi, and when the leaves fall with a bunch of organisms on it, the leaf mulch, of duff microbiome, is immense. Worms love leaf mulch. Perennial crops will only thrive when there is significant mulch built up around the base of the plant. Applying woody mulch is also beneficial.

Fallen fruit or nuts that have overwintering larvae decompose faster. On top of that, we see more birds in unsanitized orchards, scratching around and feeding on insects and soil larvae in the leaf mulch. This is free nutrients and pest control. We refer to this sequence of events as “positive compounding.” 

But when sanitation practices with tillage occur, we are creating negative compounding effects, which contribute to farm ecosystem dysfunction, leading to more reliance on fungicides and other inputs. This is one reason why the economics are failing in many orcharding industries across the U.S. We have literally created more work and expenses for ourselves.

Livestock Integration — The Disease and Pest Management Squad

Integrating livestock is one of the soil health principles that scares many orchardists. Alternatively, it’s even an excuse: “I can’t do soil health because I can’t have animals.” But when a farm commits to the integration of animals, a whole other superpower gets unlocked. Livestock are of course a very powerful tool for enhancing nutrient cycling, but I believe their greatest impact in orchards is in reducing diseases and pests. 

How does this work? First, when managed regeneratively, in particular with adaptive grazing principles, the plant diversity on the land increases. This promotes greater diversity of beneficial insects and birds — i.e., more good insects and less pest pressure. 

The manure, urine and biology from the saliva of animals enhances decomposition in the field. The organisms in their feces and fluids also play a role in enhancing the overall biology, increasing pathogen regulation. Sheep, for example, will increase the decomposition of leaf mulch and reduce the potential of high inoculant loading. They will also eat fallen nuts or fruit, including those that contain overwintering larvae such as coddling moth or naval orange worm.  Chickens, especially layers, are masters at finding larvae in the soil and from fallen fruit or “mummy” nuts. Chickens are a very powerful tool for controlling moth species, or any insect that lays their eggs and larvae in the soil and leaf litter. They also provide a great source of nutrients from their manure. If you have lots of leaf litter around the tree, the chickens will spend more time around the tree, scratching and scavenging for insects and worms. I have experienced a huge reduction of coddling moth in apples with the introduction of chickens. 

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Plant diversity brings in more beneficial insects, helping control pests.
Source: FiBL 2018

Building Habitat on the Farm

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Sanitation practices, the act or blowing, sweeping, shredding, or tilling-in fallen leaves, sometimes including applying nitrogen in order to reduce pathogenic inoculum, is a major expense in many orcharding systems and often actually increases disease. Chuck Schembre photo.

If you do not want to raise livestock, no worries — we can still bring wildlife (i.e., free workers!) to the farm. More plant diversity on the orchard floor increases predatory and beneficial insects and other wildlife. Do not underestimate the significance of this. One hundred percent of the time, when orchard-floor diversity increases, pest pressure declines. Managing the orchard floor like a grassland ecosystem or pasture for some length of time will bring grassland birds species. Just envision what they are doing down there — feeding and fertilizing. 

The Research Institute for Organic Agriculture in Europe has released a publication called “Perennial Flower Strips — A Tool for Improving Pest Control of Fruit Orchards.” It presents a long-term study comparing conventional orchard floor management with organic orchards that managed for lots of plant diversity. The organic orchards, which had no insecticides sprayed, had less apple aphid damage than the conventional orchards using standard insecticide applications. The plant diversity alone in the organic orchards, which brought in more beneficial insects, was more effective at controlling pests. 

Orchards and vineyards that have ecosystems within and outside of the fields always have more birds of prey, including raptors and owls. Barn owls and hawks can significantly control rodents, such as gophers, voles and field mice. A barn owl is a master nocturnal hunter and can consume up to 3,000 rodents in one breeding season. I highly recommend that all orchards install barn owl boxes. They are generally occupied immediately. Be sure to learn how to manage them for success. Also, install raptor perches and bluebird boxes around the farm. Raptors contribute to the control of rodents, and bluebirds feed on insects.

And last but not least, bats. Bats are magical in the orchard. A single bat can consume up to 5,000 insects per night! One colony can eat hundreds of thousands of insects in a single evening. Installing bat boxes is essential in my work — specially in orchards that battle moth or lepidoptera species. Bats love anything that flies. You do not need to install many boxes on your land to make an impact. 

I understand it can seem overwhelming to find time to do all of this, but the addition of raptor, owl, bird and bats boxes makes an incredible difference on pest pressure.

Bird Nestbox Plans

The Cornell NestWatch program (nestwatch.org) helps you figure out what species of birds are in your area and what type of nests they prefer — and it offers free downloadable plans to build nestboxes.

Conclusion

I understand this article appears to throw everything at the wall. But a whole-systems approach truly is required to achieve regenerative disease and pest control. Although products and inputs were mentioned as a tool, I want to make sure the reader walks away understanding that you are responsible for the conditions you create on your land. 

In the words of Michael Phillips, the great orchard ecologist, “If there is immense pressure from an insect or fungal pathogen … there is a deep imbalance within the farm ecosystem that calls for immediate action and attention, which no product will solve.” 

Your management determines whether disease and pests are causing uncontrollable damage or not. The foundation of the regenerative approach is farming for soil health within the guidelines of the principles. Manage the ecosystem and utilize all the tools I have mentioned in this article, and you will begin chipping away at a more economical and less toxic approach. What you may also find is that your long-term yields improve or crop quality improves. Disease and pest resilience go hand-in-hand with quality and nutrient density. 

Regenerative orcharding requires more thinking and observation. Over the years, though, more time should open up in your day, and farm economics should improve. It’s just a smarter way to farm.

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